If you miss a plane, it means you are late and don't make it in time to get aboard.
To lose a plane is when a plane just disappears and no-one knows where it is - which sadly happened last year to a Malaysian airline flight.
March 2, 2015
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To miss a plane or to miss a flight, either would be correct if you're referring to being late for a flight.
March 3, 2015
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