Technically, I would say that 'should' is used here as a strong recommendation in the context of an 'ideal' outcome. It's very close in meaning to an obligation because they would like the control concentration to be as similar as possible to the LoD of your test. I wouldn't say that it's necessarily "unacceptable" for there to be a big difference, but if this is a graded exercise, you will score higher if the two substances closely match.
I hope this makes sense. This is not my field of study. I'm just explaining the English.