Your sentence is not grammatically correct. You would have to add something to connect these 2 ideas, for example
My father has.......... To Rome, and now he is on his way back to Egypt.
However I still do not like the choice of has been or has gone because the second part of the sentence is in the present. Better
My father went to Rome, and now he is on his way back to Egypt.
Or you could make 2 sentences
My father has.been to Rome (one time or several times)
He is on his way back to Egypt (either from Rome or from someplace else).