Without the context, "missed connection" may be interpreted in two ways:
1. a connection you wanted to make which failed to work out - like a telephone call.
In this case "missed" means a "failure", and "connection" a communication channel.
2. an old relationship that no longer exists which you wish you still had.
Like, if you lost contact with someone who used to help you a lot, you would miss him/her.
Here, "missed" means "you're sorry it isn't there anymore" and "connection" a relationship.
That's my best guess.
If you need more concrete answer, you should provide the context too.