This is a really interesting question and I hope a few other people offer their thoughts, because I'm not 100% confident in my answer. That said, I believe that #2 is correct. In both versions you correctly use the conditional for the first phrase. However, I don't think the conditional is needed for the second phrase. Imagine if it were rephrased as follows: "She is telling you that I will talk to her when I see here the day after tomorrow, but she's wrong." There's nothing conditional here. Even though she's incorrect, she has, in fact, stated that she will talk to you when she sees you the day after tomorrow.
Anyone else have thoughts on this one?