To be strictly correct, I think you need to include the word "thermostat."
A "temperature" doesn't have a setting, a "room" doesn't have a setting, a "thermostat" has a setting.
"What is the thermostat set to?"
"What is the thermostat set at?"
(Both "at" and "to" are correct, both are used, both mean the same thing)
"What is the thermostat setting?"
"What is the temperature setting on the thermostat?"