I agree with what others have said: "cue applaus" means to encourage an audience to start clapping. However, I wanted to add that this is sometimes used sarcastically (as a joke).
For example:
I show my friend a cake I have baked. It is terrible. I say, "at least the kitchen's not on fire!" My friend pretends to be impressed, even though she is not. She says, "cue the applause."