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Dr. Haskell asked him what that meant in terms of actual consumption. Sam said he guessed he was down to two packs a day. American Iggles. “I used to smoke Chesterfoggies, but now they only come with the filter,” he explained. “Also, they’re expensive. Iggles is cheap, and you can pick the filter off before you light up. Easy as pie.” Then he began to cough.

Question: In this case, come with can be replaced by come up with?

Question

question
Dr. Haskell asked him what that meant in terms of actual consumption. Sam said he guessed he was down to two packs a day. American Iggles. “I used to smoke Chesterfoggies, but now they only come with the filter,” he explained. “Also, they’re expensive. Iggles is cheap, and you can pick the filter off before you light up. Easy as pie.” Then he began to cough.

Question: In this case, come with can be replaced by come up with?

Answer

No, he's stating that the pack also has a filter inside when you get it. If he stated "comes up with...," he will be saying that the pack is creating/making the filter as if it wasn't an inanimate object.